Information for 6-CTTGTTACAA (Motif 12)

A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A
Reverse Opposite:
A G C T A G C T A T C G A C G T T G C A C G T A A G T C C G T A T G C A A C T G
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.836
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif140.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets63.1 +/- 23.5bp
Average Position of motif in Background47.0 +/- 41.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTGTTACAA-
NTTGATACATT
 A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTGTTACAA----
CCGTATTATAAACAA
 A C G T A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTGTTACAA
ACTAGTTAAC-
 A C G T A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTTGTTACAA
RTCATGTGAC--
 A C G T A C G T A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTTGTTACAA-
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C G T A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTTGTTACAA--
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTTGTTACAA
ATTGTT----
 A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTTGTTACAA
NATGTTGCAA
 A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTTGTTACAA
ATTGTTA---
 A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTGTTACAA
ATTGTTTAN-
 A G T C A C G T C G A T A C T G A C G T A C G T G T C A T A G C C T G A T C G A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T