Information for 11-RKRATTYCCT (Motif 14)

C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T
Reverse Opposite:
G T C A C T A G A C T G T C G A C G T A C G T A A G C T A G C T G T A C G A T C
p-value:1e-7
log p-value:-1.799e+01
Information Content per bp:1.721
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.30%
Number of Background Sequences with motif619.9
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets37.9 +/- 26.3bp
Average Position of motif in Background50.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:RKRATTYCCT---
---ATTTCCTGTN
 C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-RKRATTYCCT
GGGAATTTCC-
 A C G T C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-RKRATTYCCT
GGGAATTTCC-
 A C G T C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-RKRATTYCCT
GGGGATTTCC-
 A C G T C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:RKRATTYCCT---
---ATTTCCTGTN
 C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-RKRATTYCCT
GGGGATTTCC-
 A C G T C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:RKRATTYCCT----
-TTACTTCCTNGTN
 C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:RKRATTYCCT---
---ACTTCCTGBT
 C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:RKRATTYCCT---
---ACTTCCTGNT
 C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--RKRATTYCCT
NGGGGATTTCCC
 A C G T A C G T C T A G C A T G C T G A C T G A C G A T A C G T A G C T A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C