Information for 5-TGATTTGCAGGAA (Motif 12)

C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A
Reverse Opposite:
G A C T A C G T T A G C G T A C C G A T A C T G G T A C G T C A G T C A C T G A G C A T T A G C G C T A
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.636
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif397.6
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets54.2 +/- 27.6bp
Average Position of motif in Background49.9 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGATTTGCAGGAA-
NNNCTTTCCAGGAAA
 A C G T C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGATTTGCAGGAA-
NGCTTTCTAGGAAN
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGATTTGCAGGAA--
-NATTTCCNGGAAAT
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T A C G T
A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGATTTGCAGGAA-
--NTTTCCNGGAAA
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T
A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGATTTGCAGGAA--
-NNCTTCCNGGAAGN
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T A C G T
A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TGATTTGCAGGAA-
---TTTCCAGGAAA
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGATTTGCAGGAA----
---TTTCCAGGAAATGG
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TGATTTGCAGGAA---
------ACAGGAAGTG
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TGATTTGCAGGAA
---CTTCCNGGAA
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A
A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGATTTGCAGGAA--
-----NACAGGAAAT
 C G A T A T C G C G T A A G C T C A G T C A G T C A T G T G A C C G T A C A T G A C T G G T C A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T