Information for 9-AAAATAGAGTGTC (Motif 11)

C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
Reverse Opposite:
A T C G C G T A A G T C C G T A G T A C A C G T A T G C A C G T C T G A A G C T A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.127e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.4 +/- 25.7bp
Average Position of motif in Background62.7 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAAATAGAGTGTC
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AAAATAGAGTGTC
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAATAGAGTGTC
CCAAAAATAG------
 A C G T A C G T A C G T C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAATAGAGTGTC
GCTAAAAATAGC-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAATAGAGTGTC
KCCAAAAATAGC-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAATAGAGTGTC-
----TTRAGTGSYK
 C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAAATAGAGTGTC-
----TTGAGTGSTT
 C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAATAGAGTGTC
TCTAAAAATAGA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAATAGAGTGTC
ACTATAAATAGA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAAATAGAGTGTC
---BTBRAGTGSN
 C G T A C G T A C G T A C T G A A G C T C G T A A T C G C G T A A C T G A C G T A C T G A C G T A T G C
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C