Information for 18-CATAACTCTGAAT (Motif 31)

G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
Reverse Opposite:
T C G A A G C T C G A T G A T C C G T A C A T G C G T A C A T G C G A T G A C T G C T A C G A T C A T G
p-value:1e-7
log p-value:-1.614e+01
Information Content per bp:1.655
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.72%
Number of Background Sequences with motif728.0
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets56.6 +/- 27.1bp
Average Position of motif in Background51.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CATAACTCTGAAT
-ATGACCTTGAA-
 G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATAACTCTGAAT--
YATGCATATRCATRT
 G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATAACTCTGAAT
CTCATGAATATTCAT
 A C G T A C G T G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATAACTCTGAAT
GGCCATAAATCA----
 A C G T A C G T A C G T G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATAACTCTGAAT--
TNNAGAACAATANATNN
 A C G T A C G T G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CATAACTCTGAAT
GCCATAAATCA----
 A C G T A C G T G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CATAACTCTGAAT
GGCCATAAATCA----
 A C G T A C G T A C G T G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CATAACTCTGAAT
GGCCATAAATCAC---
 A C G T A C G T A C G T G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATAACTCTGAAT
-ATGACTCAGCAD
 G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CATAACTCTGAAT
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A C G A T C T G A G C T A G T A C G C A T G T A C C G A T C T A G C G T A C T G A A G C T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T