Information for 3-AACTGATTGA (Motif 20)

G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A
Reverse Opposite:
A C G T T A G C C G T A C G T A A C G T A G T C C G T A A C T G G A C T C A G T
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.849
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif112.5
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets55.9 +/- 22.2bp
Average Position of motif in Background49.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AACTGATTGA-----
NNANTGATTGATNNNN
 A C G T G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AACTGATTGA-----
NNANTGATTGATNTTN
 A C G T G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:AACTGATTGA
--TTGATTGN
 G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AACTGATTGA---
-TTTGATTGATGN
 G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:AACTGATTGA---
---TGATTGATGA
 G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PB0197.1_Zfp105_2/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AACTGATTGA-----
NAAANTTATTGAANCAN
 A C G T A C G T G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AACTGATTGA----
---TGATTTATGGC
 G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AACTGATTGA-------
--CTGATTGGTCNATTT
 G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AACTGATTGA----
--ATGATKGATGRC
 G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AACTGATTGA-
-GNTAATTGGN
 G T C A C T G A G T A C A C G T T C A G C G T A A C G T A C G T A T C G C G T A A C G T
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G