Information for 3-WKSRRYTSAKAACAWT (Motif 3)

C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T
Reverse Opposite:
C G T A C G A T A C G T A C T G A C G T A C G T G T A C A C G T A T C G C G T A C T A G A G T C A G C T A T C G G T C A C G A T
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.790
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 27.8bp
Average Position of motif in Background51.7 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:WKSRRYTSAKAACAWT--
----NTTNAGAACAATTA
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:WKSRRYTSAKAACAWT----
----NNTNANAACAATTNNA
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.69
Offset:5
Orientation:forward strand
Alignment:WKSRRYTSAKAACAWT-----
-----TTTAGAACAATAAAAT
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.69
Offset:5
Orientation:forward strand
Alignment:WKSRRYTSAKAACAWT-----
-----TTAAGAACAATAAATT
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.68
Offset:9
Orientation:reverse strand
Alignment:WKSRRYTSAKAACAWT
---------NAACAAT
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:WKSRRYTSAKAACAWT------
-----TNNAGAACAATANATNN
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:forward strand
Alignment:WKSRRYTSAKAACAWT------
-----TAGTGAACAATAGATTT
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:WKSRRYTSAKAACAWT--
---ATGTCACAACAACAC
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.64
Offset:10
Orientation:reverse strand
Alignment:WKSRRYTSAKAACAWT
----------AACAAT
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:WKSRRYTSAKAACAWT---------
---AATAAAGAACAATAGAATTTCA
 C G T A A C G T A T G C C T G A C T A G A G T C A C G T A T G C C G T A A C T G C G T A C G T A A G T C C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A