Information for 2-TCATTATAAT (Motif 10)

A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C T G G T C A
p-value:1e-4
log p-value:-9.872e+00
Information Content per bp:1.939
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif78.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.0 +/- 27.9bp
Average Position of motif in Background58.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TCATTATAAT----
NANTATTATAATTNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TCATTATAAT----
TTTAATTATAATTAAG
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--TCATTATAAT----
NNTAATTATAATTNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--TCATTATAAT----
TAAGATTATAATACGG
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------TCATTATAAT-
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TCATTATAAT
AGCTCATTAT---
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TCATTATAAT-
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCATTATAAT
YCATTAMC--
 A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCATTATAAT
CTAATTAA---
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCATTATAAT
AGTAATTAAC--
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T G T C A C G T A G C A T
T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T A C G T