Information for 5-CTCGGAACCCAAG (Motif 9)

A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G
Reverse Opposite:
A G T C A G C T A C G T A T C G A T C G A T C G A C G T A C G T A G T C G T A C C T A G C G T A A C T G
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.862
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 16.0bp
Average Position of motif in Background50.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTCGGAACCCAAG
--TGGAACAGMA-
 A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCGGAACCCAAG
TTCTTGGAAAN----
 A C G T A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTCGGAACCCAAG---
-----AAGGCAAGTGT
 A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCGGAACCCAAG
CTTCTGGGAAA-----
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCGGAACCCAAG-
--CGGAAGTGAAAC
 A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G A C G T
A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCGGAACCCAAG
NTTTCTNAGAAA-----
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCGGAACCCAAG
CCTTTGATGT----
 A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCGGAACCCAAG--
-TCGAAACCGAAACT
 A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G A C G T A C G T
A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTCGGAACCCAAG-------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTCGGAACCCAAG
CSTGGGAAAD----
 A C G T A G T C A C G T A G T C A C T G A C T G C G T A C G T A A T G C A T G C A T G C G T C A C T G A A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T