Information for 3-AMAGAMCMGGGGMSTS (Motif 5)

G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C
Reverse Opposite:
A T C G C G T A A T C G A C G T A G T C A G T C A G T C A G T C A C G T A C T G C A T G C G A T G T A C A C G T A C T G A C G T
p-value:1e-11
log p-value:-2.610e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 16.0bp
Average Position of motif in Background34.8 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AMAGAMCMGGGGMSTS
-------TGGGGA---
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:2
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AMAGAMCMGGGGMSTS--
-------GGGGGCGTGGC
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AMAGAMCMGGGGMSTS
-NTGCCCANNGGTNA-
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AMAGAMCMGGGGMSTS
GAAGAACAGGTGTCCG
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AMAGAMCMGGGGMSTS----
--CAAAAAGGGGCGTGGCAT
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AMAGAMCMGGGGMSTS
NNNNTGACCCGGCGCG--
 A C G T A C G T G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AMAGAMCMGGGGMSTS
-CACAGCAGGGGG---
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:AMAGAMCMGGGGMSTS----
-------AGGGGAATCCCCT
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

SP3/MA0746.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AMAGAMCMGGGGMSTS--
-------GGGGGCGTGGN
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:AMAGAMCMGGGGMSTS----
--------GGGGATTCCCCC
 G T C A G T A C C G T A A C T G C G T A G T A C A G T C G T C A A C T G A C T G A C T G C T A G G T C A A T G C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C