Information for 12-CYTMSCTAGSAWK (Motif 21)

A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G
Reverse Opposite:
G T A C C G T A A C G T A T G C A G T C A C G T C T G A A C T G A T C G C A T G C G T A C T A G A C T G
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.819
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.7 +/- 32.6bp
Average Position of motif in Background43.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CYTMSCTAGSAWK-----
--CTACTAGGATGTNNTN
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CYTMSCTAGSAWK--
-TTTCCTAGAAAGCA
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G A C G T A C G T
A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CYTMSCTAGSAWK
-TTTCCCAGAAN-
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CYTMSCTAGSAWK---
TCTTTCGAGGAATTTG
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CYTMSCTAGSAWK---
-TTTCCTGGAAAGNNN
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G A C G T A C G T A C G T
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CYTMSCTAGSAWK
-TTCCKNAGAA--
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G
A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CYTMSCTAGSAWK-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CYTMSCTAGSAWK
GTTAACTAGN---
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CYTMSCTAGSAWK---
-TACCATAGCAACGGT
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

STAT1/MA0137.3/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CYTMSCTAGSAWK
-TTTCCTGGAAA-
 A G T C A G T C A C G T G T A C A T G C A G T C A G C T C G T A A C T G A T C G C G T A C G A T A C T G
A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T