p-value: | 1e-8 |
log p-value: | -1.905e+01 |
Information Content per bp: | 1.940 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.54% |
Number of Background Sequences with motif | 3.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.6 +/- 36.8bp |
Average Position of motif in Background | 44.7 +/- 18.1bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0050.1_Osr1_1/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGCAGTAGCA--- ATTTACAGTAGCAAAA |
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PB0051.1_Osr2_1/Jaspar
Match Rank: | 2 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGCAGTAGCA--- ATGTACAGTAGCAAAG |
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PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CGCAGTAGCA--- ADGGYAGYAGCATCT |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGCAGTAGCA-- CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGCAGTAGCA-- GAGCACAGCAGGACA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGCAGTAGCA-- CCACACAGCAGGAGA |
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DMRT3/MA0610.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGCAGTAGCA-- -AATGTATCAAT |
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PB0155.1_Osr2_2/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CGCAGTAGCA--- NNTGTAGGTAGCANNT |
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Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGCAGTAGCA----------- -GAAGTANCACGAATNMRAGT |
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PB0154.1_Osr1_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CGCAGTAGCA--- NNNTTAGGTAGCNTNT |
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