Information for 1-GAACAGAATGTTC (Motif 1)

C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C
Reverse Opposite:
A C T G G T C A T C G A A G T C C G T A G A C T A G C T G A T C G C A T C T A G G C A T G A C T G A T C
p-value:1e-41
log p-value:-9.557e+01
Information Content per bp:1.630
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.66%
Number of Background Sequences with motif181.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets48.1 +/- 24.4bp
Average Position of motif in Background52.1 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GAACAGAATGTTC--
GRACAGWMTGTYCTB
 C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GAACAGAATGTTC--
GAACADWATGTTCTT
 C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GAACAGAATGTTC--
GVACAGNMTGTYCTB
 C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGAATGTTC--
AGNACANNNTGTNCTN
 A C G T C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

NR3C2/MA0727.1/Jaspar

Match Rank:5
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GAACAGAATGTTC--
GGGAACACAATGTTCCC
 A C G T A C G T C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GAACAGAATGTTC--
AGNACAGNCTGTTCTN
 A C G T C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GAACAGAATGTTC--
GGGTACATAATGTTCCC
 A C G T A C G T C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GAACAGAATGTTC--
GGGAACACGGTGTACCC
 A C G T A C G T C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAACAGAATGTTC
ARGAGGMCAAAATGW--
 A C G T A C G T A C G T A C G T C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAACAGAATGTTC
-AACAGGAAGT--
 C A T G C T G A C G T A G A T C C G T A C T A G T C G A C T G A G C A T C T A G A G C T C A G T T G A C
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T