Information for 1-GGCKTTTGCA (Motif 5)

C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A
Reverse Opposite:
C G A T A T C G G A T C G C T A T G C A G T C A T G C A T C A G G T A C G T A C
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.606
Number of Target Sequences with motif168.0
Percentage of Target Sequences with motif19.24%
Number of Background Sequences with motif5113.9
Percentage of Background Sequences with motif10.67%
Average Position of motif in Targets50.3 +/- 26.5bp
Average Position of motif in Background50.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCKTTTGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCKTTTGCA--
GTGCCGTGTGCAAA
 A C G T A C G T C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCKTTTGCA---
-GGGATTGCATNN
 C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCKTTTGCA---
TTCATTTGCATAT
 C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCKTTTGCA----
TGGACTTTGNNCTCN
 A C G T C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCKTTTGCA----
ANATTTTTGCAANTN
 A C G T C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGCKTTTGCA---
---ATTTGCATAA
 C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCKTTTGCA--
-NATTGTGCAAT
 C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGCKTTTGCA---
---ATTTGCATAT
 C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCKTTTGCA
VBSYGTCTGG-
 A C G T C A T G C A T G A G T C A C G T C A G T A C G T C G A T C T A G T A G C G C T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T