Information for 1-CCGTCCCAGTGCCACA (Motif 1)

A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C T G A C T G A C T G C T G A G T A C A C T G C T A G
p-value:1e-15
log p-value:-3.660e+01
Information Content per bp:1.937
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.7 +/- 25.5bp
Average Position of motif in Background58.8 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGTCCCAGTGCCACA-
-TGACCCAGTGACCTAC
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCCCAGTGCCACA
NNNNTGCCAGTGATTG-
 A C G T A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CCGTCCCAGTGCCACA
NNNTCCATCCCATAANN---
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CCGTCCCAGTGCCACA-
--------ATGCCAACC
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CCGTCCCAGTGCCACA-
-------GGTGCCAAGT
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCGTCCCAGTGCCACA
TTGGCATGGTGCCA--
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CCGTCCCAGTGCCACA-
-CGACCAACTGCCATGC
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CCGTCCCAGTGCCACA
-------CGTGCCAAG
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CCGTCCCAGTGCCACA-
--------ATGCCCACC
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CCGTCCCAGTGCCACA----
----GGGTGTGCCCAAAAGG
 A G T C A G T C A C T G A G C T A G T C A G T C A G T C G T C A A C T G A C G T A C T G A G T C A G T C G T C A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G