Information for 2-CCCGCTCGCMGCCGCG (Motif 9)

A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
Reverse Opposite:
T G A C A C T G A T G C A T C G A C T G G T A C A C T G A C T G A T G C A T C G G T C A A C T G T A G C T C A G C T A G A C T G
p-value:1e-17
log p-value:-3.937e+01
Information Content per bp:1.745
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets58.5 +/- 26.8bp
Average Position of motif in Background46.3 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCCGCTCGCMGCCGCG
------CGCAGCTGCG
 A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCGCTCGCMGCCGCG----
---TCACCCCGCCCCAAATT
 A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCGCTCGCMGCCGCG
GCCCCGCCCCCTCCC---
 A C G T A C G T A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCGCTCGCMGCCGCG----
----ATCCCCGCCCCTAAAA
 A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCCGCTCGCMGCCGCG
----GGCCCCGCCCCC
 A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCCGCTCGCMGCCGCG-
--GACCCCCCGCTGCGC
 A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G A C G T
A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCCGCTCGCMGCCGCG
TCCCCCCCCCCCCCC----
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCGCTCGCMGCCGCG
TGCCCCCGGGCA------
 A C G T A C G T A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCCGCTCGCMGCCGCG
----TGCGCAGGCGC-
 A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCCGCTCGCMGCCGCG
-----GCCCCGCCCCC
 A G T C A G T C A G T C A T C G A G T C C A G T A T G C T A C G A G T C G T A C A C T G A G T C A T G C A T C G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C