Information for 2-AGGACATTGT (Motif 7)

T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T
Reverse Opposite:
C G T A T A G C T C G A G C T A C G A T A C T G A C G T G A T C T G A C A G C T
p-value:1e-17
log p-value:-3.937e+01
Information Content per bp:1.573
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.8 +/- 26.5bp
Average Position of motif in Background43.7 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGGACATTGT-
--CTCATTGTC
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.75
Offset:3
Orientation:forward strand
Alignment:AGGACATTGT---
---CCATTGTTYB
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGGACATTGT--
--NCCATTGTTY
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AGGACATTGT--
---CCATTGTTC
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:AGGACATTGT---
---CCATTGTTNY
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.72
Offset:5
Orientation:forward strand
Alignment:AGGACATTGT-
-----ATTGTT
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.72
Offset:4
Orientation:forward strand
Alignment:AGGACATTGT
----CTTTGT
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGGACATTGT-----
ANNTCCATTGTTCNNN
 A C G T T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGGACATTGT---
---CCWTTGTYYB
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.70
Offset:5
Orientation:forward strand
Alignment:AGGACATTGT--
-----ATTGTTA
 T C G A A C T G C T A G T C G A T G A C G C T A C G A T A G C T A T C G G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T