Information for 23-ATCGTTGAGG (Motif 42)

C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G
Reverse Opposite:
A G T C A T G C G C A T A G T C G C T A T G C A A T G C A T C G T G C A C G A T
p-value:1e-8
log p-value:-1.866e+01
Information Content per bp:1.683
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets49.6 +/- 24.7bp
Average Position of motif in Background39.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATCGTTGAGG
ANCGTTTANN
 C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

GLIS1/MA0735.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATCGTTGAGG----
GCTTCGTGGGGGGTCT
 A C G T A C G T C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G A C G T A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCGTTGAGG
ATTGTTA---
 C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATCGTTGAGG
TTATCGATTA--
 A C G T A C G T C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATCGTTGAGG--
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATCGTTGAGG---
---NNTGTGGTTT
 C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATCGTTGAGG---
----TTGCGGTTT
 C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATCGTTGAGG---
--GTCTGTGGTTT
 C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATCGTTGAGG-
-TGGGTGTGGC
 C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G A C G T
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATCGTTGAGG
---GTGGAT-
 C G T A A C G T A T G C T A C G A C G T C A G T C T A G C G T A A T C G T C A G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T