Information for 22-TGTCCCTATGGAG (Motif 41)

A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
Reverse Opposite:
A T G C A C G T A G T C A G T C C G T A A G C T G T C A A C T G C A T G C T A G C G T A T A G C G T C A
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.663
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets46.5 +/- 26.2bp
Average Position of motif in Background53.3 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGTCCCTATGGAG
NGTCCCNNGGGA-
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTCCCTATGGAG-
ANTCCCTNGGGAAT
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTCCCTATGGAG
GTCCCCAGGGGA-
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTCCCTATGGAG--
ATTCCCTGAGGGGAA
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGTCCCTATGGAG--
ATTGCCTGAGGCGAA
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCCTATGGAG
CTGTTGCTAGGS--
 A C G T A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTCCCTATGGAG
ATGCCCTGAGGC-
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTCCCTATGGAG
WTGSCCTSAGGS-
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCCTATGGAG
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGTCCCTATGGAG
--ACCATATGGT-
 A C G T A T C G G A C T A G T C G T A C G T A C A C G T T C G A G C A T T A C G T A C G G T C A T A C G
A C G T A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T