Information for 20-AGAGAAATATCCC (Motif 38)

C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C
Reverse Opposite:
C A T G C T A G A T C G T G C A A G C T C G T A A G C T A C G T A C G T A G T C G A C T A T G C G A C T
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.407
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets39.2 +/- 26.9bp
Average Position of motif in Background67.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAAATATCCC
GAAAGTGAAAGT----
 A C G T A C G T A C G T C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGAGAAATATCCC-
--GGGAAATCCCCN
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGAGAAATATCCC
---GGAAANCCCC
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGAGAAATATCCC
---GGAAATCCCC
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAGAAATATCCC
---GGAAATTCCC
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGAAATATCCC-
GGAGAAAGGTGCGA
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAATATCCC---
GACAGAGATATCAGTGT
 A C G T C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAGAAATATCCC
---GGAAATTCCC
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGAGAAATATCCC-
---AAGATATCCTT
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C A C G T
A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGAAATATCCC
AGAGGAA------
 C T G A T A C G C T G A T C A G T G C A T G C A T C G A G C A T T C G A A C G T T A G C G A T C G T A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T