Information for 18-GACAAAGCTA (Motif 35)

C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
Reverse Opposite:
A C G T T G C A A T C G G T A C A C G T A C G T A G C T C A T G A G C T G T A C
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.684
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets65.7 +/- 17.1bp
Average Position of motif in Background73.3 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCTA
VRRACAAWGG--
 A C G T A C G T C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GACAAAGCTA
-ACAAAG---
 C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCTA
GGAACAAAGR--
 A C G T A C G T C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCTA
AAAACAAAGG--
 A C G T A C G T C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GACAAAGCTA
RACAAWGG--
 C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GACAAAGCTA-
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCTA
AAAACAATGG--
 A C G T A C G T C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GACAAAGCTA---
-ACAAAGGNBCCT
 C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A A C G T A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACAAAGCTA
AACAAAGG--
 C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGCTA
RNAACAATGG--
 A C G T A C G T C A T G T C G A G T A C T C G A T C G A C G T A A C T G T A G C A C G T T G C A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T