Information for 15-GCGGACCTTA (Motif 34)

A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A
Reverse Opposite:
A G C T T C G A C T G A A C T G T A C G C A G T A T G C T G A C T A C G A T G C
p-value:1e-10
log p-value:-2.438e+01
Information Content per bp:1.722
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets44.5 +/- 34.4bp
Average Position of motif in Background74.3 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACCTTA
NCGCGGACGTTG
 A C G T A C G T A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCGGACCTTA
--TGACCTYA
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCGGACCTTA
--TGACCT--
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCGGACCTTA-
-NTGACCTTGA
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGGACCTTA
-GTGACCTT-
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCGGACCTTA-
-ATGACCTTGA
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCGGACCTTA--
--TGACCTTGAT
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCGGACCTTA-
-CTGACCTTTG
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGGACCTTA-----
GCTGACCTTGAACTN
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGGACCTTA--
--TGACCTTGAV
 A T C G A T G C A C T G A T C G G T C A A T G C A G T C A G C T A G C T T C G A A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A