Information for 18-CCAABAGCAGSAC (Motif 33)

A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C
Reverse Opposite:
A T C G C G A T A T G C A G T C A C G T A C T G A T G C G C A T T A C G A G C T A C G T A C T G A T C G
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.754
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.9 +/- 24.2bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCAABAGCAGSAC-
--CACAGCAGGGGG
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAABAGCAGSAC-
CCACACAGCAGGAGA
 A C G T A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCAABAGCAGSAC--
-----ANCAGGATGT
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCAABAGCAGSAC--
-----GGGAGGACNG
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCAABAGCAGSAC
-CAGCAGCTGN--
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCAABAGCAGSAC-----
-NNNNAGCAGCTGCTGAN
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCAABAGCAGSAC
-NAACAGCTGG--
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCAABAGCAGSAC
--AACAGCTGCAG
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCAABAGCAGSAC-
CCACACAGCAGGAGA
 A C G T A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCAABAGCAGSAC---
-DCHCAGCAGGRGGCC
 A T G C A G T C G T C A T C G A A T G C C G T A A T C G G T A C C G T A A C T G A T C G C G T A T A G C A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C