Information for 17-TGTCCTTAGCAGA (Motif 32)

C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
Reverse Opposite:
A C G T G T A C C A G T A C T G A G T C G A C T T C G A T G C A C T A G C A T G T G C A T A G C C G T A
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.676
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets32.8 +/- 13.8bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTAGCAGA--
TGWCCTCARNTGACC
 C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A A C G T A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTAGCAGA
TGACCTYA-----
 C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTAGCAGA---
NTNTTCTTATCAGTNTN
 A C G T C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTAGCAGA
GTGACCTT------
 A C G T C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTAGCAGA
CTGACCTTTG----
 A C G T C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTTAGCAGA
BNTGDCCTTG-----
 A C G T A C G T C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTAGCAGA
CTGTTCCTGG----
 A C G T C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTAGCAGA
TGACCTTGAV---
 C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTAGCAGA
TGACCTTGAN---
 C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTTAGCAGA
NTGACCTTGA----
 A C G T C G A T A T C G A C G T G A T C A G T C A C G T A G C T C T G A T C A G T A G C G T C A A C T G G T C A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T