Information for 3-CCCGGAGCCACCA (Motif 3)

A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
Reverse Opposite:
C A G T C A T G T C A G A C G T A C T G A C T G G A T C A C G T A T G C G A T C T A C G A C T G A C T G
p-value:1e-20
log p-value:-4.728e+01
Information Content per bp:1.769
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.3 +/- 31.7bp
Average Position of motif in Background48.0 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCCGGAGCCACCA
--CGGAGC-----
 A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGAGCCACCA-
TGCCTGCGYCMCCTT
 A C G T A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCACCA
TGCCCCCGGGCA---
 A C G T A C G T A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCACCA--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCACCA
TGCCCCAGGGCA---
 A C G T A C G T A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCGGAGCCACCA
GRTGMTRGAGCC----
 A C G T A C G T A C G T A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCCGGAGCCACCA
----CAGCC----
 A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCACCA
TGCCCCAGGGCA---
 A C G T A C G T A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCACCA--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCCGGAGCCACCA
-----ATCCAC--
 A G T C G T A C A T G C C T A G A T C G T G C A C A T G A G T C G T A C T C G A A G T C G A T C G T C A
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T