Information for 16-CRCCCTSATGTGG (Motif 27)

A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C G T C A A T G C T C G A C A G T A T C G C G T A C T A G A C T G T C A G A G T C A T C G
p-value:1e-12
log p-value:-2.807e+01
Information Content per bp:1.746
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.7 +/- 25.3bp
Average Position of motif in Background16.0 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CRCCCTSATGTGG
CCCCCTGCTGTG-
 A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CRCCCTSATGTGG
GGCCYCCTGCTGDGH
 A C G T A C G T A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CRCCCTSATGTGG
GACCCCCCGCTGTG-
 A C G T A C G T A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CRCCCTSATGTGG--
NNTCCTGCTGTGNNN
 A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CRCCCTSATGTGG--
TNTCCTGCTGTGNNG
 A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CRCCCTSATGTGG
GACCCCCCGCTGCGC
 A C G T A C G T A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CRCCCTSATGTGG
GACCCCCCGCTGTGC
 A C G T A C G T A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CRCCCTSATGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CRCCCTSATGTGG--
TCNCCTGCTGNGNNN
 A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CRCCCTSATGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A T G C T C A G A G T C A G T C A G T C A C G T A T G C G T C A A G C T A T C G A C G T A C T G A T C G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A