Information for 15-CAGMRYTCAAGTT (Motif 26)

A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C G T A C T G C G T A C T A G A G C T A C G T A G T C A C G T A C T G
p-value:1e-12
log p-value:-2.807e+01
Information Content per bp:1.909
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.5 +/- 20.4bp
Average Position of motif in Background16.6 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CAGMRYTCAAGTT-
-----NTCAAGTGG
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGMRYTCAAGTT-----
-NANTTTCAAGTGGTTAN
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAGMRYTCAAGTT--
---GKVTCADRTTWC
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGMRYTCAAGTT--
-----NTCAAGTGGN
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGMRYTCAAGTT
AGCCACTCAAG--
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGMRYTCAAGTT----
--AAGTTCAAGGTCAGC
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGMRYTCAAGTT---
-----TTCAAGGTCAT
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGMRYTCAAGTT-----
--AAATTCAAGTGGNTTN
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGMRYTCAAGTT-----
--AANTTCAAGTGGCTTN
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGMRYTCAAGTT--
---AGGTCAAGGTCA
 A G T C C G T A A C T G G T A C C T A G A G C T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A