Information for 9-CCAGTTTCCG (Motif 20)

T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G
Reverse Opposite:
A G T C A C T G A C T G C T G A G T C A C T G A G T A C C G A T A T C G A C T G
p-value:1e-12
log p-value:-2.914e+01
Information Content per bp:1.752
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets46.3 +/- 27.4bp
Average Position of motif in Background35.8 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCCG--
--ATTTTCCATT
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T
A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCCG--
--ATTTTCCATT
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCCG--
--ATTTTCCATT
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCCG--
--NRYTTCCGGY
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T
A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCCG--
--NRYTTCCGGH
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T
A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCAGTTTCCG-----
-CAGTTTCGNTTCTN
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCAGTTTCCG------
CCGTCTTCCCCCTCAC
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCAGTTTCCG
GGGAATTTCC-
 A C G T T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCCG--
--HACTTCCGGY
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T
A C G T A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCAGTTTCCG--
----CTTCCGGT
 T A G C A T G C G C T A A C T G A G C T A C G T A G C T A G T C G T A C T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T