Information for 7-CGAAGACACK (Motif 18)

T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G
Reverse Opposite:
G T A C A C T G A C G T A C T G A C G T A G T C A G C T A G C T A G T C A T C G
p-value:1e-13
log p-value:-3.066e+01
Information Content per bp:1.738
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets59.5 +/- 25.3bp
Average Position of motif in Background43.4 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGAAGACACK
NGAAGC----
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGAAGACACK---
TAACGACACGTGC
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

POL007.1_BREd/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGAAGACACK
--NANANAC-
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAAGACACK--
SSAATCCACANN
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGAAGACACK---
AGGGAAGTCATTTCT
 A C G T A C G T T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGAAGACACK
TCCAATCCACA
 A C G T T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGAAGACACK-
-CCAGACRSVB
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGAAGACACK----
----GACACGTGCC
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGAAGACACK
-CCAGACAG-
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGAAGACACK
-BCAGACWA-
 T A G C T C A G T C G A C T G A A C T G T G C A G T A C C G T A A G T C A C T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T