Information for 3-CATGGCTAGA (Motif 10)

A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A
Reverse Opposite:
A G C T A G T C A G C T C G T A A C T G A G T C T A G C C G T A A G C T A C T G
p-value:1e-15
log p-value:-3.552e+01
Information Content per bp:1.881
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.8 +/- 25.8bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CATGGCTAGA--
--TGTCTAGACG
 A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A A C G T A C G T
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CATGGCTAGA
---NGCTN--
 A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATGGCTAGA
-TWGTCTGV-
 A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CATGGCTAGA----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGGCTAGA-
-ATGGGGTGAT
 A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATGGCTAGA-----
-TTTCCTAGAAAGCA
 A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CATGGCTAGA----
--TGGCGGGAAAHB
 A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CATGGCTAGA
NGTTGCCATGGCAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CATGGCTAGA------
GACATGTCTGGACATGTC
 A C G T A C G T A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATGGCTAGA-
-CWGGCGGGAA
 A G T C C T G A A C G T A C T G A C T G A G T C A C G T C T G A A C T G C T G A A C G T
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A