Information for 3-GGACTACAGCTCC (Motif 5)

A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G G T C A C T A G G T A C G A C T A C T G C G A T C T G A A C T G A C G T A G T C A G T C
p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.786
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif61.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets40.8 +/- 24.8bp
Average Position of motif in Background42.2 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGACTACAGCTCC-
--ACTACAATTCCC
 A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGACTACAGCTCC--------
-RACTACAACTCCCAGVAKGC
 A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGACTACAGCTCC--------
-AACTACAATTCCCAGAATGC
 A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GGACTACAGCTCC-
--------GCTCCG
 A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGACTACAGCTCC
AAACCACAGC---
 A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGACTACAGCTCC--
NNGGCGACACCTCNNN
 A C G T A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGACTACAGCTCC
NWAACCACADNN--
 A C G T A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGACTACAGCTCC
NAAACCACAG----
 A C G T A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGACTACAGCTCC
-GGCTCYAKCAYC
 A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GGACTACAGCTCC
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T A C T G C T A G G T C A A G T C A G C T G C T A A G T C C G T A C A T G A G T C A C G T A G T C G T A C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T