Information for 24-TGTGAATATG (Motif 36)

A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G
Reverse Opposite:
A G T C C T G A A C G T C G T A A C G T A C G T A G T C C G T A A G T C C G T A
p-value:1e-2
log p-value:-4.665e+00
Information Content per bp:1.962
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 19.9bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGTGAATATG
TATGTAAATAT-
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGTGAATATG---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGTGAATATG-
-ATGMATATDC
 A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTGAATATG
TATGTAAATAT-
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGTGAATATG-
-ATGAATATTC
 A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATATG
AAGGTGTGAAAAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------TGTGAATATG
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGTGAATATG-
NCWRWGTAAACANSV
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATATG
AAGGTGTGAA----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGTGAATATG
AAGGTGTKAA----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T C G T A A G C T A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T