Information for 17-CCACAGACAC (Motif 30)

A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
Reverse Opposite:
A C T G A C G T A T C G A C G T A G T C A C G T A C T G A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.097e+01
Information Content per bp:1.964
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets48.5 +/- 27.4bp
Average Position of motif in Background40.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.83
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGACAC
AAACCACAGAN--
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCACAGACAC
NWAACCACADNN--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGACAC
AAACCACAGC---
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCACAGACAC--
--CCAGACRSVB
 A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCACAGACAC
NAAACCACAG----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCACAGACAC
AAACCACANN---
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCACAGACAC
--CCAGACAG
 A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCACAGACAC
-CACAGN---
 A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCACAGACAC
--BCAGACWA
 A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGACAC
CGCCCCCTGACA-
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A T G C C G T A A G T C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T