Information for 15-CTTGGTGGCATGG (Motif 25)

A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C T G A G T C T A G C C G T A A G T C A G T C C G T A C T G A A C T G
p-value:1e-6
log p-value:-1.579e+01
Information Content per bp:1.950
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 30.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTGGTGGCATGG
--GGTTGGCAT--
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGTGGCATGG-
NGTAGGTTGGCATNNN
 A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGTGGCATGG--
TNNNNGGTGTCATNTNT
 A C G T A C G T A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTTGGTGGCATGG---
--NGTTGCCATGGCAA
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTGGTGGCATGG---
--GGTTGCCATGGCAA
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTGGTGGCATGG---
--TGATGACGTGGCAN
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

KLF16/MA0741.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTTGGTGGCATGG-
---GGGGGCGTGGC
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTTGGTGGCATGG----
---GTTGCCATGGNAAC
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTTGGTGGCATGG----
TATTATGGGATGGATAA
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTTGGTGGCATGG---
--NNGTCGCGTGNCAC
 A G T C A G C T A C G T A C T G A C T G A C G T A T C G A C T G A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C