Information for 11-AGTCGGCGCTCAA (Motif 24)

C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A A C T G A G T C A C T G A G T C A G T C A C T G C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.579e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.6 +/- 29.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTCGGCGCTCAA---
CCTTCGGCGCCAAAAGG
 A C G T C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGTCGGCGCTCAA-
---AGCCACTCAAG
 C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTCGGCGCTCAA
-TTTGGCGCCAAA
 C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGTCGGCGCTCAA---
-TCCGTCGCTTAAAAG
 C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGTCGGCGCTCAA-
----NSCACTYVAV
 C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTCGGCGCTCAA---
AGCTCGGCGCCAAAAGC
 A C G T C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGTCGGCGCTCAA
---AASCACTCAA
 C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGTCGGCGCTCAA-
----RSCACTYRAG
 C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGTCGGCGCTCAA-
--TTCGCGCGAAAA
 C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGTCGGCGCTCAA-
ATAAAGGCGCGCGAT
 A C G T C G T A A C T G A C G T A G T C A C T G A C T G A G T C A C T G A G T C A C G T A G T C C G T A C G T A A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T