Information for 6-CCCTACTGAC (Motif 18)

A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A C T A G A C G T C G T A A C T G A C T G C T A G
p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.956
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.9 +/- 23.5bp
Average Position of motif in Background52.0 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCTACTGAC---
CGACCAACTGCCGTG
 A C G T A C G T A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCCTACTGAC----
TGACCCAGTGACCTAC
 A C G T A C G T A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCTACTGAC----
CGACCAACTGCCATGC
 A C G T A C G T A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCTACTGAC
CCCCCTGCTGTG
 A C G T A C G T A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCCTACTGAC---
---TGCTGACTCA
 A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCCTACTGAC-
-CCAACTGCCA
 A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCCTACTGAC-
-CCTGCTGAGH
 A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTACTGAC-
-CCAACTGCCA
 A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCTACTGAC-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCCTACTGAC--
-----TTGACAG
 A G T C A G T C A G T C A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G