Information for 11-TGAGSGMMMCMKGCCR (Motif 14)

A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G
Reverse Opposite:
G A C T A C T G A C T G A G T C G T C A C A T G A C T G A C G T A C G T A C G T A G T C A T G C A G T C A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.829
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 21.8bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES5/MA0821.1/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGAGSGMMMCMKGCCR
----CGGCACGTGCCA
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G
A C G T A C G T A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGAGSGMMMCMKGCCR-
---TGGCAGNCTGCCAG
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G A C G T
A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TGAGSGMMMCMKGCCR
----TGGCACGTGCCA
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G
A C G T A C G T A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGAGSGMMMCMKGCCR
CTTGAGTGGCT-------
 A C G T A C G T A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGAGSGMMMCMKGCCR-
---TGGCACCATGCCAA
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGAGSGMMMCMKGCCR
----SNGCACCTGCHS
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:TGAGSGMMMCMKGCCR-
------NNACTTGCCTT
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TGAGSGMMMCMKGCCR--
--TTGGCANNNTGCCAAG
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G A C G T A C G T
A C G T A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TGAGSGMMMCMKGCCR
-----GACACGTGCC-
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TGAGSGMMMCMKGCCR
TGACANARRCCAGRC-
 A C G T A C T G C G T A A C T G A T C G A C T G G T C A G T C A G T C A A G T C G T A C A C G T A C T G A G T C A G T C C T A G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T