Information for 10-CTCARCAGRGMTKACT (Motif 13)

A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T G T A C C G T A A C G T A G T C A G T C A G T C A C G T A C T G A G C T A C G T A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.7 +/- 26.1bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCARCAGRGMTKACT
CACAGCAGGGGG----
 A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCARCAGRGMTKACT
DCTCAGCAGG-------
 A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCARCAGRGMTKACT
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCARCAGRGMTKACT
DCHCAGCAGGRGGCC--
 A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTCARCAGRGMTKACT
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTCARCAGRGMTKACT
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCARCAGRGMTKACT
TGAGTCAGCA---------
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTCARCAGRGMTKACT
ATGACTCAGCAD--------
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:9
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CTCARCAGRGMTKACT
AGGATGACTCAGCAC--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTCARCAGRGMTKACT----
---NANAGGGATTAATTATN
 A G T C A C G T A G T C C G T A C T A G A G T C C G T A A C T G C T A G A C T G G T C A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C