p-value: | 1e-13 |
log p-value: | -3.073e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.74% |
Number of Background Sequences with motif | 1.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 67.5 +/- 15.8bp |
Average Position of motif in Background | 26.5 +/- 14.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCAGAGGGCAAGGCAA ----AGGTCAAGGTCA |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCAGAGGGCAAGGCAA ----AGGTCAAGGTCA |
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Nr5a2/MA0505.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCAGAGGGCAAGGCAA-- ---AAGTTCAAGGTCAGC |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCAGAGGGCAAGGCAA --TRAGGTCA------ |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGAGGGCAAGGCAA -CAAAGGTCAAGGG-- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGAGGGCAAGGCAA -CAAAGGTCAG----- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GCAGAGGGCAAGGCAA-- --------CAAGGHCANV |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCAGAGGGCAAGGCAA TAGGGCAAAGGTCA------ |
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PB0200.1_Zfp187_2/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCAGAGGGCAAGGCAA- -NNAGGGACAAGGGCNC |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCAGAGGGCAAGGCAA GGCGAGGGGTCAAGGGC- |
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