Information for 12-GTCCCCGGGGACA (Motif 18)

A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
Reverse Opposite:
G A C T A C T G C G A T A G T C T A G C A G T C A G T C C T A G A C T G A T C G A C T G C G T A A G T C
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 22.1bp
Average Position of motif in Background47.4 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GTCCCCGGGGACA
NGTCCCNNGGGA--
 A C G T A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GTCCCCGGGGACA
ATTCCCAAGGGAAT
 A C G T A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCCCCGGGGACA
-TCCCCTGGGGAC
 A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTCCCCGGGGACA
-TCCCCA------
 A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCCCCGGGGACA-
--SCCTAGCAACAG
 A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCCCCGGGGACA
CTGTTCCTGG-----
 A C G T A C G T A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCCCCGGGGACA
-TGCCCCCGGGCA
 A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GTCCCCGGGGACA
CAACGTCCGCGG-----
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCCCCGGGGACA
-TGCCCTNGGGCA
 A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCCCCGGGGACA
-TGCCCCAGGGCA
 A C T G A C G T A G T C A T G C G T A C A G T C C T A G A C T G A C T G A C T G C G T A A G T C C T G A
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A