Information for 1-TTTGCCATGC (Motif 11)

A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C
Reverse Opposite:
T A C G A G T C C G T A A C G T C T A G C T A G G A T C C G T A G T C A T G C A
p-value:1e-11
log p-value:-2.710e+01
Information Content per bp:1.832
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif135.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets51.1 +/- 26.4bp
Average Position of motif in Background49.1 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCATGC
ATTTTCCATT-
 A C G T A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCATGC----
CTTTGTTATGCAAAT
 A C G T A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C A C G T A C G T A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCATGC
ATTTTCCATT-
 A C G T A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCCATGC--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCCATGC
CTGTTGCTAGGS
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTTGCCATGC
-TTGCCAAG-
 A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCCATGC--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTGCCATGC-----
-TTGCCATGGCAACC
 A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTGCCATGC----
GTTGCCATGGNAAC
 A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C A C G T A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCATGC
HTTTCCCASG-
 A C G T A C G T A C G T A C G T C T A G A G T C G A T C C G T A A C G T T C A G A T G C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T