Information for 3-TTTGAAATGG (Motif 15)

A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
Reverse Opposite:
A G T C A G T C G T C A A G C T A G C T A C G T A G T C C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.848
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets62.3 +/- 22.4bp
Average Position of motif in Background57.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTGAAATGG
TTTGAAACCG
 A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATGG
CCTTTGATGT--
 A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAATGG
ATTTGAATT--
 A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATGG
CCTTTGAWGT--
 A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAAATGG----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATGG----
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAAATGG
NATTGTGCAAT--
 A C G T A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAATGG----
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAAATGG
TNCCTTTGATGT--
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAAATGG
TNCCTTTGATCTTN
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G G T C A C T G A C T G A A C G T A C T G T C A G
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T