Information for 6-AGAAGGRGCATATKTT (Motif 9)

C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
Reverse Opposite:
C G T A T C G A T G C A C G T A A C G T G T C A C G A T A C T G A G T C G A T C G T A C A T G C A G C T A C G T A G T C C G A T
p-value:1e-11
log p-value:-2.717e+01
Information Content per bp:1.750
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.5 +/- 22.0bp
Average Position of motif in Background58.8 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE22/MA0818.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AGAAGGRGCATATKTT
------ANCATATGGT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGAAGGRGCATATKTT
------ANCATATGGT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

OLIG1/MA0826.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGAAGGRGCATATKTT
------AACATATGTT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGAAGGRGCATATKTT-
-----NAACATATGTTT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

OLIG2/MA0678.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGAAGGRGCATATKTT
------ACCATATGGT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGAAGGRGCATATKTT
------ANCATATGTT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGAAGGRGCATATKTT
------GACATATGTT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGAAGGRGCATATKTT
--AAGAGGATTAG---
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAAGGRGCATATKTT-
TTAAGGGGATTAACTAC
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAAGGRGCATATKTT-
TGAGGGGGATTAACTAT
 C G T A A C T G C G T A C T G A A T C G A C T G C T A G A C T G G T A C C G T A A C G T G T C A C G A T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T