Information for 2-CTTTGTGCTGTGC (Motif 6)

A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C C G T A A C T G G T A C G T C A T A G C C G T A C G T A C T G A A C T G
p-value:1e-12
log p-value:-2.772e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 30.2bp
Average Position of motif in Background55.7 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CTTTGTGCTGTGC
------GCTGTG-
 A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGCTGTGC
YCTTTGTTCC----
 A C G T A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTTGTGCTGTGC----
-NNNNTTGTGTGCTTNN
 A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGCTGTGC
CCTTTGTTTT----
 A C G T A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTGTGCTGTGC--
NNTCCTGCTGTGNNN
 A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTGCTGTGC
CCWTTGTYYB----
 A C G T A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTTTGTGCTGTGC
CTTTGT-------
 A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTGTGCTGTGC
CCCCCTGCTGTG-
 A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTTGTGCTGTGC--
TNTCCTGCTGTGNNG
 A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTTTGTGCTGTGC----
-------CTGTTCCTGG
 A G T C A G C T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G