Information for 1-GTTTTCTGCA (Motif 5)

A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
Reverse Opposite:
C A G T C T A G T A G C C G T A T C A G G T C A T G C A G T C A G T C A T G A C
p-value:1e-12
log p-value:-2.817e+01
Information Content per bp:1.685
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif9.27%
Number of Background Sequences with motif1782.5
Percentage of Background Sequences with motif3.64%
Average Position of motif in Targets49.5 +/- 26.7bp
Average Position of motif in Background50.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTCTGCA----
ANATTTTTGCAANTN
 A C G T A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTTTTCTGCA
ATTTCCTGTN
 A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTTTCTGCA
ATTTCCTGTN
 A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTTTTCTGCA---
CCATTGTATGCAAAT
 A C G T A C G T A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTCTGCA---
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

GATA2/MA0036.2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTTTTCTGCA
AGATTCTTATCTGT-
 A C G T A C G T A C G T A C G T A C G T A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTCTGCA
NCCTTATCTG--
 A C G T A C G T A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTTTTCTGCA
NNCTTATCTN--
 A C G T A C G T A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTTTTCTGCA
TCTTATCTCCC
 A C G T A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTTTTCTGCA
-TWGTCTGV-
 A C T G C A G T C A G T A C G T C A G T A G T C C G A T A T C G G A T C G T C A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T