Information for 3-GCCTGCCCAAGAHVGA (Motif 4)

A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
Reverse Opposite:
A C G T A T G C A T C G C A G T A C G T A G T C A G C T A C G T A C T G A C T G C T A G A G T C C G T A A T C G A T C G A G T C
p-value:1e-13
log p-value:-3.131e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 25.6bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCCCAAGAHVGA
GGGTGTGCCCAAAAGG--
 A C G T A C G T A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCTGCCCAAGAHVGA
---TGCCCAGNHW---
 A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCTGCCCAAGAHVGA
--ATGCCCACC-----
 A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCTGCCCAAGAHVGA
GCGCCTGCGCA-------
 A C G T A C G T A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCTGCCCAAGAHVGA---
---TACCCACAATGCATTG
 A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCCTGCCCAAGAHVGA
--CTGCCCGCA-----
 A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCCTGCCCAAGAHVGA
NGCTTTCTAGGAAN--
 A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCCTGCCCAAGAHVGA
-GGTGCCAAGT-----
 A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCCTGCCCAAGAHVGA
--NTGCCCANNGGTNA
 A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGCCCAAGAHVGA
GCGCATGCGCAG------
 A C G T A C G T A C T G A T G C A T G C C G A T A C T G A G T C A G T C A G T C C G T A C T G A C T A G C G T A G C T A T A C G A T C G C G T A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T