Information for 21-GGATATGGCCATA (Motif 39)

A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A
Reverse Opposite:
A C G T G T C A A C G T A C T G A C T G G T A C A G T C C G T A A C G T C G T A C G A T A T G C G T A C
p-value:1e-7
log p-value:-1.691e+01
Information Content per bp:1.862
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 19.6bp
Average Position of motif in Background53.8 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGATATGGCCATA-
---TATGTAAATAT
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

POU3F1/MA0786.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGATATGGCCATA-
--TTATGCAAATTA
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A A C G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGATATGGCCATA
---TATGCAAAT-
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A
A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGATATGGCCATA
AAGGATATNTN----
 A C G T A C G T A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGATATGGCCATA
---TATGCAAAT-
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGATATGGCCATA-
---TATGTAAATAT
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGATATGGCCATA
ACCATATGGC----
 A C G T A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGATATGGCCATA-
--TTATGCAAATTA
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A A C G T
A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGATATGGCCATA
-AATATGCAAATT
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A
A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGATATGGCCATA
--TTATGCAAAT-
 A C T G A T C G G C T A A C G T C G T A A C G T A C T G A C T G A G T C G T A C C G T A A C G T C G T A
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T