Information for 20-GATGGCCATCTTC (Motif 38)

A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
Reverse Opposite:
T C A G C G T A C T G A T A C G T C G A G C A T A C T G C T A G T A G C A G T C C G T A A G C T A T G C
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.675
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif217.7
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets41.0 +/- 28.8bp
Average Position of motif in Background53.5 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATGGCCATCTTC
-GCNGCCATCTTG
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GATGGCCATCTTC
-GCCGCCATCTTG
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GATGGCCATCTTC
--TGACCTARTT-
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GATGGCCATCTTC
BNTGDCCTTG---
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GATGGCCATCTTC--------
-----CCGTCTTCCCCCTCAC
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GATGGCCATCTTC
NAGATWNBNATCTNN
 A C G T A C G T A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGCCATCTTC
NNANTGGTGGTCTTNNN-
 A C G T A C G T A C G T A C G T A C G T A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GATGGCCATCTTC
--TGACCTTGAT-
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GATGGCCATCTTC-
----GCCATCTGTT
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GATGGCCATCTTC
-ATGCCCACC---
 A T C G T C G A G A C T C T A G A T C G G A T C A G T C C G T A A G C T A T G C G A C T C G A T A G T C
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T