Information for 19-CCAAGGTCCACCTAGC (Motif 34)

A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
Reverse Opposite:
A T C G A G T C G A C T G T C A A T C G A T C G A C G T A T C G C T A G C T G A A G T C A G T C A G C T A G C T A C T G T C A G
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.692
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets57.8 +/- 20.3bp
Average Position of motif in Background52.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0014.1_Esrra_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAAGGTCCACCTAGC
TATTCAAGGTCATGCGA--
 A C G T A C G T A C G T A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAAGGTCCACCTAGC
NTCAAGGTCA-------
 A C G T A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCAAGGTCCACCTAGC
BTCAAGGTCA-------
 A C G T A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCAAGGTCCACCTAGC
-CAAGGHCANV-----
 A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAAGGTCCACCTAGC
TCAAGGTCAN------
 A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAAGGTCCACCTAGC
TCAAGGTCAT------
 A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCAAGGTCCACCTAGC
AAGTTCAAGGTCAGC-----
 A C G T A C G T A C G T A C G T A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGGTCCACCTAGC
TCAAGGTCATA-----
 A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCAAGGTCCACCTAGC
CANAGNNCAAAGTCCA------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCAAGGTCCACCTAGC
CAAAGGTCAG------
 A G T C G T A C T C G A C T G A C T A G C T A G A G C T A G T C A T G C C G T A A T G C A T G C A C G T C T G A C T A G A T G C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T