Information for 13-GCTTCAGVTTCAG (Motif 31)

A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A G T C A A C G T A G T C A C G T A C T G C G T A C T G A A C T G A G T C
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.864
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.0 +/- 27.1bp
Average Position of motif in Background42.9 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTTCAGVTTCAG
GCTTCC-------
 A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTTCAGVTTCAG
AGTTTCAGTTTC--
 A C G T A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCAGVTTCAG
GGCTCYAKCAYC--
 A C G T A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTTCAGVTTCAG
--TTCAAGGTCAT
 A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCAGVTTCAG
ACTTTCACTTTC--
 A C G T A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCAGVTTCAG
AGTTTCGGTTTCGN
 A C G T A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTTCAGVTTCAG
AGTTTCAKTTTC--
 A C G T A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTTCAGVTTCAG
ACTTCCGGNT---
 A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTTCAGVTTCAG-
AAGTTCAAGGTCAGC
 A C G T A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCTTCAGVTTCAG
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C T G A G T C A G C T A C G T A G T C C G T A C T A G T A C G A C G T A C G T A G T C G T C A A C T G
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T